PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010097403.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 309aa    MW: 34464.1 Da    PI: 6.2515
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010097403.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.82.7e-184796255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ GVr+++ +grWvAeI+d +   ++ r +lg+f taeeAa+a+++a+  l+g
  XP_010097403.1 47 KFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEEAARAYDEAACLLRG 96
                    799******.7*********32...35**********************99987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103219.58547104IPR001471AP2/ERF domain
SMARTSM003801.9E-3647110IPR001471AP2/ERF domain
PfamPF008476.4E-134796IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.3E-2847104IPR001471AP2/ERF domain
SuperFamilySSF541713.99E-1947104IPR016177DNA-binding domain
CDDcd000183.05E-3148103No hitNo description
PRINTSPR003671.1E-74859IPR001471AP2/ERF domain
PRINTSPR003671.1E-77086IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MEIHFQQENQ QYFKTIGIQS SSKGKRGKFK GRNKNDNKII NNNNTNKFVG VRQRPSGRWV  60
AEIKDTTQKI RMWLGTFETA EEAARAYDEA ACLLRGSNTR TNFITHVSAD SPLASRIRNL  120
LNNKKRAKHQ EGFDSSPKNS ITKTSTSSVT TTNSSTSCTS STTISSCGST SINSSSCGIL  180
QDSTTIDQLF DDAYKPDMSN CNEEAVLQLS SPQYSTNHSW GFGATFDRFP FADTTDPQVL  240
DLSKNDQDQA DEPETAAQSE FLEFERMKVE RQISASLYAM NGVQEYMETV HDPAELCGIF  300
LLCVHCFAN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010097403.10.0Ethylene-responsive transcription factor
TrEMBLW9RCL90.0W9RCL9_9R
STRINGVIT_08s0007g07250.t015e-98(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33413069
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-27related to AP2 11